Repositories list

• k-dense-byok

  Public
  An AI co-scientist running on your desktop. Claude Science but better.

  bioinformaticsmcpscientific-computing+ 11

  bioinformaticsmcpscientific-computingdrug-discoveryresearch-assistantlocal-firstai-assistantai-agentbyokopenrouter+ 4

  TypeScript

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  MIT License

  •177177 forks in K-Dense-AI/k-dense-byok•1.4k1.4k stars in K-Dense-AI/k-dense-byok•77 issues in K-Dense-AI/k-dense-byok•44 pull requests in K-Dense-AI/k-dense-byok•Updated Oct 16, 2026Oct 16, 2026

• scientific-agent-skills

  Public

  K-Dense-AI/scientific-agent-skills’s past year of commit activity
  Turn any AI agent into an AI Scientist. The #1 Agent Skills library for science, used by 250,000+ scientists worldwide. 177 ready-to-use validated skills plus 1…

  bioinformaticsgenomicscomputational-biology+ 14

  bioinformaticsgenomicscomputational-biologyscientific-visualizationscientific-computingdrug-discoverydata-analysisproteomicsmetabolomicschemoinformatics+ 7

  Python

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  MIT License

  •4.6k4.6k forks in K-Dense-AI/scientific-agent-skills•52k52k stars in K-Dense-AI/scientific-agent-skills•88 issues in K-Dense-AI/scientific-agent-skills•4141 pull requests in K-Dense-AI/scientific-agent-skills•Updated Oct 15, 2026Oct 15, 2026

• drug-discovery-agent-skills

  Public

  K-Dense-AI/drug-discovery-agent-skills’s past year of commit activity
  Agent Skills for small-molecule and protein therapeutics: cheminformatics, molecular ML, docking and dynamics, protein design platforms, and target-discovery kn…

  pythonmachine-learningbioinformatics+ 17

  pythonmachine-learningbioinformaticsdeep-learningcheminformaticsskillsstructural-biologymolecular-dynamicscomputational-chemistryknowledge-graph+ 10

  Python

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  MIT License

  •44 forks in K-Dense-AI/drug-discovery-agent-skills•4242 stars in K-Dense-AI/drug-discovery-agent-skills•00 issues in K-Dense-AI/drug-discovery-agent-skills•11 pull request in K-Dense-AI/drug-discovery-agent-skills•Updated Oct 12, 2026Oct 12, 2026

• claude-scientific-writer

  Public

  K-Dense-AI/claude-scientific-writer’s past year of commit activity
  A general purpose scientific writer

  toolsskillswriter+ 3

  toolsskillswriterai-agentsclaudeanthropic

  Python

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  MIT License

  •298298 forks in K-Dense-AI/claude-scientific-writer•2.5k2.5k stars in K-Dense-AI/claude-scientific-writer•11 issue in K-Dense-AI/claude-scientific-writer•55 pull requests in K-Dense-AI/claude-scientific-writer•Updated Oct 9, 2026Oct 9, 2026

• scientific-agents

  Public
  Expert-thinking AGENTS.md profiles that teach AI agents to reason like senior scientists and engineers.

  scienceai-agentsllm+ 3

  scienceai-agentsllmprompt-engineeringagentic-aiagents-md

  Python

  •

  MIT License

  •3333 forks in K-Dense-AI/scientific-agents•214214 stars in K-Dense-AI/scientific-agents•11 issue in K-Dense-AI/scientific-agents•00 pull requests in K-Dense-AI/scientific-agents•Updated Oct 2, 2026Oct 2, 2026

• lab-instrument-mcps

  Public
  Open-source MCP servers that let AI agents operate real lab instruments, with safety limits, read-only modes, audit trails, and a simulator for every instrument…

  pythonlaboratorymcp+ 7

  pythonlaboratorymcplab-automationinstrument-controlai-agentsscientific-instrumentsmodel-context-protocolmcp-serverself-driving-labs

  Python

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  Apache License 2.0

  •11 fork in K-Dense-AI/lab-instrument-mcps•2020 stars in K-Dense-AI/lab-instrument-mcps•00 issues in K-Dense-AI/lab-instrument-mcps•00 pull requests in K-Dense-AI/lab-instrument-mcps•Updated Sep 26, 2026Sep 26, 2026

• science-superpowers

  Public
  Composable computational-science methodology skills for AI research agents — pre-registration over TDD. A science-domain reimplementation of Superpowers.

  reproducible-researchcomputational-scienceai-agents+ 2

  reproducible-researchcomputational-scienceai-agentspreregistrationagent-skills

  Shell

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  Other

  •3737 forks in K-Dense-AI/science-superpowers•358358 stars in K-Dense-AI/science-superpowers•22 issues in K-Dense-AI/science-superpowers•00 pull requests in K-Dense-AI/science-superpowers•Updated Sep 13, 2026Sep 13, 2026

• mimeo

  Public
  Mimeograph an expert into a SKILL.md or AGENTS.md for your agent.

  Python

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  MIT License

  •3838 forks in K-Dense-AI/mimeo•285285 stars in K-Dense-AI/mimeo•11 issue in K-Dense-AI/mimeo•00 pull requests in K-Dense-AI/mimeo•Updated Sep 2, 2026Sep 2, 2026

• hf-mva-hackathon-2026

  Public
  K-Dense Track 1 submission for the Rare Disease, Real Kid: MVA Hackathon 2026 — reproducible phenotype-guided variant prioritization

  Python

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  Other

  •00 forks in K-Dense-AI/hf-mva-hackathon-2026•00 stars in K-Dense-AI/hf-mva-hackathon-2026•00 issues in K-Dense-AI/hf-mva-hackathon-2026•00 pull requests in K-Dense-AI/hf-mva-hackathon-2026•Updated Aug 28, 2026Aug 28, 2026

• agentic-data-scientist

  Public
  An end-to-end Data Scientist

  data-sciencemachine-learningagentic-ai

  data-sciencemachine-learningagentic-ai

  Python

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  MIT License

  •124124 forks in K-Dense-AI/agentic-data-scientist•830830 stars in K-Dense-AI/agentic-data-scientist•00 issues in K-Dense-AI/agentic-data-scientist•22 pull requests in K-Dense-AI/agentic-data-scientist•Updated Aug 18, 2026Aug 18, 2026

• karpathy

  Public
  An agentic Machine Learning Engineer

  machine-learningautomlagentic-ai

  machine-learningautomlagentic-ai

  Python

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  MIT License

  •178178 forks in K-Dense-AI/karpathy•1.6k1.6k stars in K-Dense-AI/karpathy•11 issue in K-Dense-AI/karpathy•22 pull requests in K-Dense-AI/karpathy•Updated Aug 18, 2026Aug 18, 2026

• rowan-autosearch

  Public
  Agent-driven molecular optimization over chemical space, using Rowan for property scoring and RDKit for constraint-aware candidate design.

  computational-chemistrydrug-discoveryrdkit+ 6

  computational-chemistrydrug-discoveryrdkitchemoinformaticsai-agentsmolecular-designrowanmolecular-optimizationagentic-workflows

  Python

  •44 forks in K-Dense-AI/rowan-autosearch•2525 stars in K-Dense-AI/rowan-autosearch•00 issues in K-Dense-AI/rowan-autosearch•00 pull requests in K-Dense-AI/rowan-autosearch•Updated Aug 18, 2026Aug 18, 2026

• .github

  Public
  00 forks in K-Dense-AI/.github•11 star in K-Dense-AI/.github•00 issues in K-Dense-AI/.github•00 pull requests in K-Dense-AI/.github•Updated Aug 18, 2026Aug 18, 2026

• skill-101-webinar

  Public
  55 forks in K-Dense-AI/skill-101-webinar•88 stars in K-Dense-AI/skill-101-webinar•00 issues in K-Dense-AI/skill-101-webinar•00 pull requests in K-Dense-AI/skill-101-webinar•Updated Aug 18, 2026Aug 18, 2026

• mimeographs

  Public
  Ready-to-use agent skills that clone the thinking of founders, philosophers, and scientists into your agent. Generated with K-Dense-AI/mimeo.

  Python

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  MIT License

  •1818 forks in K-Dense-AI/mimeographs•129129 stars in K-Dense-AI/mimeographs•11 issue in K-Dense-AI/mimeographs•00 pull requests in K-Dense-AI/mimeographs•Updated Aug 18, 2026Aug 18, 2026

• claude-skills-mcp

  Public
  MCP server for searching and retrieving Scientific Agent Skills using vector search

  Python

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  Apache License 2.0

  •7676 forks in K-Dense-AI/claude-skills-mcp•407407 stars in K-Dense-AI/claude-skills-mcp•00 issues in K-Dense-AI/claude-skills-mcp•00 pull requests in K-Dense-AI/claude-skills-mcp•Updated Jul 20, 2026Jul 20, 2026