This GIT repository is a collection of scripts used in the (pre-)processing and phenotype-extraction from Magnetic Resonance Imaging (MRI) and Positron Emission Tomography (PET) images in AMYPAD (Amyloid imaging to prevent Alzheimer's Disease), a consortium in the making. The AMYPAD-PNHS in its current form consists of the full EPAD-LCS as well. To request the neuroimaging data, please see here.
The provided scripts and atlases aim to support open-science practices and increase replicability and understanding of the neuroimaging data utilized in the AMYPAD-PNHS.
Clone this directory into your BIDS-conforming study directory under ${studydir}/code, then read corresponding README.md documentations to understand how to utilize specific scripts.
To understand how to structure and organize your neuroimaging dataset, see https://bids.neuroimaging.io
- Leonard Pieperhoff, MSc (l.pieperhoff@amsterdamumc.nl)
- Luigi Lorenzini, PhD (l.lorenzini@amsterdamumc.nl)
- Mario Tranfa, MD (m.tranfa@amsterdamumc.nl)
- Prithvi Arunachalam, MSc (p.arunachalam@amsterdamumc.nl)
- Federico Masserini, MD (f.masserini@amsterdamumc.nl)
Date: 2025-04-29