Issues

• cpan hanging

  cancerit/PCAP-core#74 · Filter by author jsmedmar opened on May 2, 2025

• A compilation error occurred when testing mismatchQc in Makefile

  cancerit/PCAP-core#73 · Filter by author zhangzhen opened on Mar 13, 2025

• a installation error

  cancerit/PCAP-core#70 · Filter by author wul99 opened on May 2, 2022

• bam_stats fails to give informative error on BAMs with no RG lines/tags

  bug
  cancerit/PCAP-core#66 · Filter by author leovam opened on Jul 22, 2021
  8

  

• support for irods: protocol

  cancerit/PCAP-core#53 · Filter by author mgcam opened on Feb 6, 2020

• C: Makefile should work with htslib installation

  cancerit/PCAP-core#48 · Filter by author keiranmraine opened on Sep 27, 2019

• should not use '\t' as header separator

  cancerit/PCAP-core#47 · Filter by author byb121 opened on Aug 27, 2019

• Improve yaml to make paired read processing more robust

  enhancement
  cancerit/PCAP-core#29 · Filter by author keiranmraine opened on Jan 30, 2019
  1

• CI: Add small exec of fq, bam and cram

  enhancement
  cancerit/PCAP-core#22 · Filter by author keiranmraine opened on Mar 15, 2018
  4

• phase out use of biobambam2

  enhancement
  cancerit/PCAP-core#14 · Filter by author keiranmraine opened on Feb 14, 2018