setup: Replace directory-level install with per-asset merge-aware install - #180
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setup: Replace directory-level install with per-asset merge-aware install#180davidabram wants to merge 1 commit into
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…tall sce setup previously staged the full catalog into a temp directory and swapped it over the whole .claude/, .opencode/, or .pi/ target directory, destroying any user-owned files (skills, settings.local.json, CLAUDE.md, etc.) living alongside SCE's own assets. The two generated JSON configs (.claude/settings.json, .opencode/opencode.json) had the same problem one level down: written whole, they clobbered a user's permissions, env, model, mcp, or non-SCE hook/plugin entries. Installation now happens per asset: each embedded file is staged and atomically renamed into place individually, and assets the current selection or catalog no longer owns are pruned by relative path instead of the whole directory being rebuilt. The two config files are merged via a new config_merge module that replaces only the SCE-owned fragment (hook entries by marker, plugin paths by prefix) and leaves every other key and entry untouched, idempotently across repeated installs. sce doctor's integration inspection is updated to match: the two merge-target configs are checked by whether their SCE-owned fragment is current rather than by byte-exact sha256, and `--fix` gained a repair path that reinstalls just a drifted merge-target asset.
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