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    9 repositories

    • RamplotR

      Public
      R shiny app for making Ramachandran plots
      shiny
      shiny
      R
      •
      MIT License
      •51•6•0•1•Updated Oct 7, 2026Oct 7, 2026

    • MAniR

      Public
      Maldi and ANI correlation plot visualizer shiny app
      visualizationdiversityr
      visualizationdiversityrcorrelationgenomicsshinyheatmapdata-analysiscorrelation-analysiscorrplot
      R
      •
      GNU General Public License v3.0
      •0•0•0•2•Updated Sep 29, 2026Sep 29, 2026

    • Rhea_pipeline

      Public
      Shiny app for a workflow from the Rhea pipeline
      shiny
      shiny
      R
      •
      MIT License
      •3•5•0•0•Updated Feb 22, 2023Feb 22, 2023

    • MS-PEP

      Public
      A shiny app to analyze mass spectrometry data for peptide cleavage patterns
      shiny
      shiny
      R
      •14•2•0•1•Updated Dec 23, 2021Dec 23, 2021

    • Fasta_to_GFA

      Public
      A small python script converting Fasta files to GFA files for visualization in Bandage
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Oct 26, 2021Oct 26, 2021

    • ggdc-robot

      Public
      Automatically submit jobs to the Genome-to-Genome Distance Calculator (GGDC) website.
      Python
      •1•0•0•0•Updated Sep 2, 2021Sep 2, 2021

    • Flye

      Public
      De novo assembler for single molecule sequencing reads using repeat graphs
      C
      •
      Other
      •188•0•0•0•Updated Jun 27, 2021Jun 27, 2021

    • pysam

      Public
      Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, …
      C
      •
      MIT License
      •304•0•0•0•Updated Apr 6, 2020Apr 6, 2020

    • blast-example

      Public
      A basic blast pipeline using nextflow
      Nextflow
      •17•0•0•0•Updated Feb 29, 2020Feb 29, 2020
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