Repositories list

• verified-extraction-audit

  Public
  Code for the paper `Privacy Audits for Clinical Large Language Models`

  privacyclinicalaudit+ 1

  privacyclinicalauditllm

  Python

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 15, 2026Aug 15, 2026

• DifFracTion

  Public
  Systematic normalization and differential interaction identification for cross-sample comparison of Hi-C datasets

  Jupyter Notebook

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Jul 23, 2026Jul 23, 2026

• SCoNE

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 16, 2026Jul 16, 2026

• Alzheimers_CSF_EV_Proteomics_Integration

  Public
  Scripts for the manuscript: Integrating CSF and EV Proteomes Enhances Biomarker Discovery by Capturing Shared Variation Across Compartments

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 30, 2026Jun 30, 2026

• prs-privacy

  Public
  Go

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Jun 27, 2026Jun 27, 2026

• PanMixer

  Public
  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 6, 2026Jun 6, 2026

• allofus_unsupervised_pheno

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 20, 2026May 20, 2026

• PLayer-FL

  Public
  This repository contains the official implementation for the paper "PLayer-FL: A principled approach to personalized layer-wise cross-silo Federated Learning".

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 17, 2026Mar 17, 2026

• Atlas2AoU

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 18, 2026Feb 18, 2026

• pCSAC

  Public
  C++

  •11 fork•44 stars•33 issues•00 pull requests•Updated Sep 26, 2025Sep 26, 2025

• NHP_Alzheimers_Proteomics

  Public
  Scripts for the NHP_Alzheimer’s_Proteomics paper

  R

  •11 fork•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• goldfleck-pipeline

  Public
  Multi species genome alignment + read to species identification

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 30, 2025Aug 30, 2025

• scattr

  Public
  A tool for estimating the copy number of large tandem repeats

  Rust

  •

  Apache License 2.0

  •00 forks•1010 stars•88 issues•1212 pull requests•Updated Jul 1, 2025Jul 1, 2025

• otcost_fl

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 12, 2025Jun 12, 2025

• phenotyping-gwas-eval

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 1, 2025Jun 1, 2025

• pC-SAC_vs_DeepLearning-benchmark

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 16, 2025May 16, 2025

• keep

  Public
  Python

  •00 forks•22 stars•00 issues•00 pull requests•Updated May 5, 2025May 5, 2025

• UKBBPhenotyping

  Public
  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 1, 2025May 1, 2025

• pQuant

  Public
  Jupyter Notebook

  •

  MIT License

  •00 forks•33 stars•00 issues•00 pull requests•Updated Feb 6, 2025Feb 6, 2025

• SQUiD

  Public
  Ultra-Secure Storage and Analysis of Genetic Data for the Advancement of Precision Medicine

  C++

  •

  GNU General Public License v3.0

  •11 fork•66 stars•00 issues•00 pull requests•Updated Dec 31, 2024Dec 31, 2024

• privateQTL

  Public
  Secure and Federated Quantitative Trait Loci Mapping with privateQTL

  C++

  •00 forks•11 star•00 issues•00 pull requests•Updated Dec 2, 2024Dec 2, 2024

• prs-privacy-data

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Oct 29, 2024Oct 29, 2024

• HElibPublicKeySwitch

  Public
  HElib with Public Key-Switch

  C++

  •

  Other

  •760760 forks•00 stars•00 issues•00 pull requests•Updated Oct 18, 2024Oct 18, 2024

• padicBGV

  Public
  p-adic arithmetic for BGV

  C++

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 27, 2024Aug 27, 2024

• metaCRISPRs

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 19, 2024Aug 19, 2024

• scPrivacy

  Public
  Analysis and method implementation for exploring private information leakage from single-cell RNA-seq count matrices

  Python

  •

  GNU General Public License v3.0

  •22 forks•44 stars•11 issue•00 pull requests•Updated Aug 15, 2024Aug 15, 2024

• PrecisionChain

  Public
  software to automate the set-up, insertion and querying of clinical and genetic data

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •11 fork•55 stars•00 issues•00 pull requests•Updated Jul 19, 2024Jul 19, 2024

• ot_cost

  Public
  Jupyter Notebook

  •11 fork•11 star•00 issues•00 pull requests•Updated Jun 5, 2024Jun 5, 2024

• pcfbl

  Public
  implementation of privacy-preserving CBFL

  Python

  •11 fork•55 stars•00 issues•00 pull requests•Updated Jul 17, 2023Jul 17, 2023

• SampleJemDocWebsite

  Public
  Template for JemDoc personal website

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 1, 2023Feb 1, 2023