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@GenomicDataInfrastructure Genomic Data Infrastructure

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    44 repositories

    • standard-operating-procedures

      Public
      A repository for managing standard operating procedure (SOP) resources for the GDI project.
      Python
      •
      GNU Affero General Public License v3.0
      •6•8•32•4•Updated Sep 9, 2026Sep 9, 2026

    • gdi-userportal-frontend

      Public
      TypeScript
      •2•1•4•9•Updated Sep 9, 2026Sep 9, 2026

    • gdi-userportal-dataset-discovery-service

      Public
      Java
      •2•2•3•0•Updated Sep 9, 2026Sep 9, 2026

    • starter-kit

      Public
      Starter kit main repo
      1•9•0•1•Updated Sep 9, 2026Sep 9, 2026

    • gdi-userportal-ckanext-fairdatapoint

      Public
      Python
      •3•0•2•6•Updated Sep 9, 2026Sep 9, 2026

    • gdi-userportal-ckanext-gdi-userportal

      Public
      Python
      •2•0•8•1•Updated Sep 9, 2026Sep 9, 2026

    • gdi-userportal-ckanext-dcat

      Public
      CKAN ♥ DCAT
      Python
      •155•0•0•1•Updated Sep 9, 2026Sep 9, 2026

    • keycloak-ga4gh-visa-issuer

      Public
      Java
      •0•0•1•10•Updated Sep 9, 2026Sep 9, 2026

    • gdi-userportal-rems-synchronizer

      Public
      Python
      •0•1•1•10•Updated Sep 9, 2026Sep 9, 2026

    • gdi-userportal-access-management-service

      Public
      HTML
      •0•0•4•8•Updated Sep 9, 2026Sep 9, 2026

    • gdi-userportal-deployment

      Public
      This is a deployment example of GDI User Portal, assuming RHEL-based Linux distribution.
      Shell
      •0•1•1•6•Updated Sep 4, 2026Sep 4, 2026

    • gdi-userportal-ckan-docker

      Public
      Scripts and images to run CKAN using Docker Compose
      Shell
      •279•1•3•5•Updated Aug 28, 2026Aug 28, 2026

    • oneplusmg-reference-architecture

      Public
      Reference Architecture for the 1+ Million Genomes initiative. It defines federation-wide business capabilities, services, cross-border processes, and shared int…
      TypeScript
      •0•0•0•0•Updated Jun 22, 2026Jun 22, 2026

    • gdi-metadata

      Public
      HTML
      •0•3•1•1•Updated Apr 8, 2026Apr 8, 2026

    • .github

      Public
      Profile Readme
      0•0•0•0•Updated Mar 23, 2026Mar 23, 2026

    • oneplusmg-framework

      Public
      HTML
      •5•0•2•0•Updated Mar 13, 2026Mar 13, 2026

    • api-links

      Public
      Links to definitions and documentation for APIs used within GDI
      1•0•0•0•Updated Mar 9, 2026Mar 9, 2026

    • GDI-K8s-Resources

      Public
      Repository for shared development of Kubernetes deployment resources.
      Go Template
      •1•0•1•1•Updated Mar 4, 2026Mar 4, 2026

    • starter-kit-htsget

      Public
      GNU Affero General Public License v3.0
      •0•1•1•0•Updated Feb 20, 2026Feb 20, 2026

    • starter-kit-storage-and-interfaces

      Public
      Shell
      •
      GNU Affero General Public License v3.0
      •3•0•2•0•Updated Feb 20, 2026Feb 20, 2026

    • gdi-mini-node

      Public
      Minimal GDI Node solution in a single application. Covers FAIR Data Point and the two Beacons. The name reflects the minimal API requirements for a GDI node. It…
      Python
      •
      The Unlicense
      •0•1•0•0•Updated Jan 30, 2026Jan 30, 2026

    • starter-kit-beacon2-ri-api

      Public
      Python
      •
      Apache License 2.0
      •1•2•0•0•Updated Dec 22, 2025Dec 22, 2025

    • gdi-userportal-license-report

      Public archive
      OSS Review Toolkit for GDI User Portal.
      0•0•2•0•Updated Dec 17, 2025Dec 17, 2025

    • gdi-userportal-docs

      Public archive
      This repo will become the knowledge base for the User Portal. It will include any detail on how to run the components, architecture and other things.
      HTML
      •0•0•4•0•Updated Dec 16, 2025Dec 16, 2025

    • starter-kit-lsaai

      Public
      LS AAI
      Apache License 2.0
      •0•0•0•0•Updated Nov 14, 2025Nov 14, 2025

    • validation-framework

      Public
      Framework for specification and example on how to validate data that comes into the GDI infrastructure.
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 28, 2025Oct 28, 2025

    • starter-kit-lsaai-mock

      Public
      Apache License 2.0
      •1•1•0•0•Updated Oct 24, 2025Oct 24, 2025

    • starter-kit-se-deployment-notes

      Public
      Python
      •1•6•1•0•Updated Aug 18, 2025Aug 18, 2025

    • service-portfolio-catalogue

      Public
      Template repository for the FitSM service catalogue / portfolio
      1•0•0•0•Updated Jul 10, 2025Jul 10, 2025

    • FI-Federated-Analytics

      Public
      Repo for FI Federated Analytics
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 29, 2025Apr 29, 2025
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