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@NKI-AI NKI AI for Oncology Lab

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    59 repositories

    • dlux

      Public
      Python
      •
      Apache License 2.0
      •0•2•0•0•Updated Aug 31, 2026Aug 31, 2026

    • direct

      Public
      Deep learning framework for MRI reconstruction
      deep-learningpytorchmedical-imaging
      deep-learningpytorchmedical-imaginginverse-problemsmri-reconstructionfastmri-challenge
      Python
      •
      Apache License 2.0
      •50•320•1•0•Updated Aug 27, 2026Aug 27, 2026

    • fastslide

      Public
      C++ whole slide image reader with native python bindings
      C++
      •
      Apache License 2.0
      •3•55•7•1•Updated Aug 27, 2026Aug 27, 2026

    • dlup

      Public
      Dlup are the Deep Learning Utilities for Pathology developed at the Netherlands Cancer Institute
      Python
      •
      Apache License 2.0
      •6•30•0•0•Updated Aug 9, 2026Aug 9, 2026

    • simpletiff

      Public
      C++
      •
      Apache License 2.0
      •0•1•0•0•Updated Jul 9, 2026Jul 9, 2026

    • ectil

      Public
      ECTIL: Label-efficient Computational Tumour Infiltrating Lymphocyte (TIL) assessment in breast cancer: Multicentre validation in 2,340 patients with breast canc…
      Python
      •
      Apache License 2.0
      •1•5•1•1•Updated Jun 15, 2026Jun 15, 2026

    • fimage

      Public
      C++
      •
      Apache License 2.0
      •0•0•0•0•Updated Jun 13, 2026Jun 13, 2026

    • qupath-extension-catalog

      Public
      0•0•0•0•Updated Jun 11, 2026Jun 11, 2026

    • qupath-extension-fastslide

      Public
      Java
      •
      GNU General Public License v3.0
      •0•0•1•0•Updated Jun 11, 2026Jun 11, 2026

    • aifocore

      Public
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Jun 9, 2026Jun 9, 2026

    • jxrlib

      Public
      C
      •
      BSD 2-Clause "Simplified" License
      •0•0•0•0•Updated Jun 9, 2026Jun 9, 2026

    • jpeg-compressor

      Public
      C++
      •0•0•0•0•Updated May 25, 2026May 25, 2026

    • dcis-biomarkers

      Public
      Python
      •0•0•0•0•Updated May 19, 2026May 19, 2026

    • rules-go-swag

      Public
      Starlark
      •
      Apache License 2.0
      •0•1•0•0•Updated Apr 18, 2026Apr 18, 2026

    • kosmos-documentation

      Public
      Documentation for the use of the internal AI for Oncology cluster Kosmos
      Makefile
      •2•1•0•2•Updated Dec 3, 2025Dec 3, 2025

    • kosmos-cluster

      Public
      Repository for Kosmos Cluster
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •357•2•0•1•Updated Oct 21, 2025Oct 21, 2025

    • conference-deadlines

      Public
      :alarm_clock: AI for oncology conference deadline countdowns
      JavaScript
      •
      MIT License
      •1.1k•0•0•0•Updated Oct 2, 2025Oct 2, 2025

    • aiforoncology

      Public
      Monorepository for the AI for Oncology lab
      Apache License 2.0
      •0•0•0•1•Updated Sep 10, 2025Sep 10, 2025

    • x2x

      Public
      From Explainable to Explained AI: Ideas for Falsifying and Quantifying Explanations
      JavaScript
      •
      GNU Lesser General Public License v2.1
      •0•4•0•0•Updated Aug 20, 2025Aug 20, 2025

    • xdrt

      Public
      XDRT (XDR Toolkit) is a python toolkit to work with the Elekta XDR and XVI file formats.
      pythoncommand-lineradiotherapy
      pythoncommand-lineradiotherapy
      Python
      •
      Other
      •6•20•3•0•Updated Apr 22, 2025Apr 22, 2025

    • paper-doyle2025

      Public
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Apr 18, 2025Apr 18, 2025

    • xtensor-python

      Public
      Python bindings for xtensor
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •65•0•0•0•Updated Apr 7, 2025Apr 7, 2025

    • RTree

      Public
      N-dimensional RTree implementation in C++
      C++
      •
      Other
      •129•0•0•0•Updated Mar 16, 2025Mar 16, 2025

    • itsper

      Public
      A simple CLI utility for computing the intra-tumoral stroma percentage biomarker from segmentations of histopathological tumor lesions.
      Python
      •
      MIT License
      •0•1•1•0•Updated Mar 3, 2025Mar 3, 2025

    • openslide-cpp

      Public
      C library for reading virtual slide images
      C
      •
      GNU Lesser General Public License v2.1
      •269•0•0•0•Updated Jan 16, 2025Jan 16, 2025

    • ahcore-legacy

      Public
      Ahcore is the AI for Oncology core computational pathology toolkit
      Python
      •
      Apache License 2.0
      •1•17•22•6•Updated Oct 3, 2024Oct 3, 2024

    • kosmos-cluster-legacy

      Public
      Tools for building GPU clusters
      Jinja
      •
      BSD 3-Clause "New" or "Revised" License
      •357•1•0•1•Updated Jul 9, 2024Jul 9, 2024

    • libisyntax

      Public
      C
      •
      BSD 2-Clause "Simplified" License
      •15•0•0•0•Updated Jul 4, 2024Jul 4, 2024

    • ansible-role-nvidia-driver

      Public
      Forked ansible nvidia driver role compatible with ubuntu 22
      Jinja
      •
      BSD 3-Clause "New" or "Revised" License
      •76•0•0•0•Updated Jun 3, 2024Jun 3, 2024

    • slidescore-api

      Public
      Python utilities to interface with SlideScore
      Python
      •
      Apache License 2.0
      •3•3•8•3•Updated Apr 30, 2024Apr 30, 2024
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