It looks like we're hard-coded for hg19 right now:
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with open("data/input.json") as f: |
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config_data = json.loads(f.read()) |
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tracks = [] |
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assembly = "hg19" |
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url_base = "https://s3.amazonaws.com/data.cloud.refinery-platform.org/data/igv-reference/{}/".format( |
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assembly |
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) |
but it shouldn't be hard to
- upload genome reference files to s3
- update this to actually read the input.json
It looks like we're hard-coded for hg19 right now:
docker_igv_js/context/on_startup.py
Lines 7 to 14 in a0a8680
but it shouldn't be hard to