Apply AI-based trait prediction from BacDive to your own genomes.
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Nov 12, 2024 - Python
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bacdive
Here are 5 public repositories matching this topic...
Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
diversity r api-client rstats microbiology bacteria r-package biobank rlang bacterial-database microorganism webservice-client bacterial bacteriology rlanguage bacterial-samples bacdive
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May 28, 2022 - R
Code to go with the https://doi.org/10.1101/271569 publication. Downloads html pages from culture-collection centers and mines these for growth temperature data.
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Nov 6, 2018 - Python
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Jun 22, 2021 - Python
Python-client for the BacDive rest API.
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Jul 4, 2024 - Python
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