Addition to the Conditional Monge Gap to extend it to Chimeric Antigen Receptor T cell scRNAseq data
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Updated
Jul 8, 2026 - Jupyter Notebook
Addition to the Conditional Monge Gap to extend it to Chimeric Antigen Receptor T cell scRNAseq data
Systematic pipeline for identifying combinatorial CAR-T targets in acute myeloid leukemia (AML) using single-cell RNA-seq data
Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.
Single-cell transcriptomic profiling of CAR T cells expressing synthetic receptors, termed "velocity CAR T" cells.
Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.
Single-cell analysis of CAR T-cell therapy responses, identifying cellular signatures and pathways associated with treatment outcomes.
Interactive dashboard tracking CAR-T, CAR-NK, CAAR-T, and CAR-γδ T clinical trials across heme- and solid-onc from ClinicalTrials.gov v2. Sister app to Rheumatology-CAR-T-Trials-Monitor.
Quantitative analysis of single-cell CAR-T and TIL killing kinetics from microwell co-culture imaging: EM mixture models for per-well kill rate, predator-prey ODE fits, and single-effector-cell statistics
R analysis of xCELLigence real-time impedance killing assays for T/CAR-cell and NK cytotoxicity
Personalized lymphoma therapy design with Gemma 4, AlphaFold, RFdiffusion. Kaggle Gemma 4 Good Hackathon submission.
Open dataset of multiple myeloma clinical trials registered in China, curated from NMPA/CDE filings with normalized trial centers, populations and registry status. CC BY 4.0.
AbelZeta Pharma — independent third-party profile of a public API surface, by API Evangelist. AbelZeta Pharma is a global clinical-stage cell therapy company discovering, developing, and manufacturing T-cell-based immunotherapeutics for cancer and immunological diseases. Its pipeline centers on Chimeric Antigen Receptor (CAR)-T cell technology acro
Kyverna Therapeutics — independent third-party profile of a public API surface, by API Evangelist. Kyverna Therapeutics (Nasdaq: KYTX) is a patient-centered, clinical-stage biopharmaceutical company headquartered in Emeryville, California, developing engineered T cell therapies for patients suffering from autoimmune diseases.
Autolus * — independent third-party profile of a public API surface, by API Evangelist. Autolus is a life-sciences (biopharmaceutical) company operating in the cell-therapy space, developing programmed / engineered T cell (CAR-T) therapies for cancer and other serious diseases. It was surfaced as a portfolio company of GV and added to the API Evang
Stylus Medicine — independent third-party profile of a public API surface, by API Evangelist. Stylus Medicine is a Cambridge, Massachusetts biotechnology company developing in vivo genetic medicines built on engineered recombinases. Its platform aims to generate precise, durable CAR-T cells directly inside the body using cell-targeted lipid nanopar
Using scRNA-seq, machine learning, and online datasets to find candidate target antigens for repurposing CAR T-cell therapy for autoimmune diseases.
Link Cell Therapies — independent third-party profile of a public API surface, by API Evangelist. Link Cell Therapies is a South San Francisco clinical-stage cell therapy company founded by Stanford investigators Robbie Majzner and Crystal Mackall in partnership with Samsara BioCapital, working on the development of safe and effective CAR T agents
Orbital Therapeutics — independent third-party profile of a public API surface, by API Evangelist. Orbital Therapeutics was a Cambridge, Massachusetts biotechnology company developing next-generation RNA medicines, combining circular and linear RNA, targeted delivery, and AI-guided design across immunomodulation, in vivo CAR-T cell therapy, next-ge
Umoja Biopharma — independent third-party profile of a public API surface, by API Evangelist. Umoja Biopharma is a Seattle-based clinical-stage immuno-oncology company developing in vivo CAR T cell therapies for cancer. Its VivoVec lentiviral platform generates CAR T cells directly in a patient's body, removing the ex vivo manufacturing step of tra
Cell Design Labs — independent third-party profile of a public API surface, by API Evangelist. Cell Design Labs, Inc. was a biotherapeutics company based at 5858 Horton Street, Emeryville, California, that engineered immune cells into "smart, living therapies" for cancer and other diseases.
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