CNV analysis based on the depth of coverage of Illumina data
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Jul 1, 2026 - Python
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gene-panels
Here are 9 public repositories matching this topic...
Human gene annotations for the oncology domain
gene driver-genes annotations cancer-genomics cancer-research functional-annotation oncogenes gene-panels tumor-suppressor-genes
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Aug 3, 2026 - R
Integrated analysis of Structural and Copy Number Variants for HTS
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Oct 24, 2025 - Perl
Simple perl script to extract mappability from a ROI file
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Sep 24, 2019 - Perl
Virtual gene panel integration for Parkinson's Disease. This workflow collects, filters, and enriches gene panels with genomic features from NCBI, producing ready-to-use BED files.
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Aug 31, 2025 - Jupyter Notebook
Analysis of sequencing coverage bias in cfDNA relative to matched tumor data from targeted sequencing.
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Apr 22, 2026 - Python
Recognize gene panels from raw FASTQ files
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Apr 22, 2026 - C++
Multi-task VAE for BRCA cancer detection and PAM50 subtype classification on TCGA/GTEx gene expression, with sparse gene-panel analysis.
bioinformatics tensorflow tcga gene-expression gtex transcriptomics breast-cancer anomaly-detection variational-autoencoder pam50 multitask-learning tcga-brca gene-panels
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Dec 13, 2025 - Jupyter Notebook
GUI coupled to a local database that centralize all NGS variant data and annotations, and to provide powerful filtering tools that are easily accessible to the biologist.
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Jan 28, 2026 - Java
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