literature-mining

An autonomous AI agent pipeline for rigorous academic research, featuring strict DOI verification, multi-agent Scopus/OpenAlex/Semantic Scholar retrieval, and APA 7th .docx generation

Reference and citation map for literature review and discovery

Literature Scanner: Automated collection & analyses of the scientific literature.

Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.

Automated meta-analysis of event-related potential (ERP) research.

A web scrapping method to extract journal information from PubMed and Google Scholar using Python.

A Unix-inspired command-line tool for searching scientific literature, built for terminal users who want speed, automation and minimal interfaces. Search PubMed, arXiv, Crossref, DOAJ and Europe PMC in one command, deduplicate results, export to BibTeX/RIS/CSV and more, and get new-paper alerts on email, Telegram, Slack and 14 other channels.

The program can be used to scrape the content from an article from web by an input of a set of URLs in a text file or a URL. This project uses newspaper3k and python-docx libraries. The output of this program will give a neatly modified Word Document in '.docx' format with the contents of the article.

Datasets de los textos de cuentos de varios autorxs latinoamericanxs. Datasets benchmarks de distintas librerías de sentiment analysis en español sobre un corpus de borges.

Analysis code for knowledge discovery project

Builds scientific-paper corpora and extracts structured, recipe-defined data with configurable text and vision models.

Easiest way to get your bibliometrics data ready and prepared

Python module to use the annotations created with NeuroCurator, for example in a Jupyter notebook.

get recommendations from arxiv based on your zotero library

Antibody Watch: Text Mining Antibody Specificity from the Literature

MeTeOR, or the MeSH Term Objective Reasoning network, is a network representation of genes, drugs, and diseases built on MeSH terms curated by the National Library of Medicine

A wrapper for the scholarly library to scrape Google Scholar entries through a keyword search, and add suggested DOIs using CrossRef with habanero.

Learn to predict in metabolic engineering

Set of Transforms for exploring the academic literature

Named Entity Resolution, Extraction, and Linking of Lexically Similar Names