broadinstitute / pooled-cell-painting-profiling-recipe Star 7 Code Issues Pull requests Recipe for profile creation for pooled image-based/morphological profiling (including Cell Painting) experiments data-science recipe pooled-screen cell-painting morphological-profiling pooled-cell-painting in-situ-sequencing Updated Aug 5, 2026 Python
broadinstitute / pooled-cell-painting-profiling-template Star 2 Code Issues Pull requests 🛠️ Use me to version control Pooled Cell Painting data and processing pipelines pooled-screen cell-painting carpenter-lab pooled-cell-painting template-repository in-situ-sequencing Updated May 21, 2024 Python
jeonglab-bcm / BARCS-manuscript Star 1 Code Issues Pull requests Discussions Design-matrix beta-binomial regression, benchmarks, and manuscript for quantitative CRISPR pooled screens crispr r-package pooled-screen beta-binomial Updated Aug 31, 2026 Shell
sanket-desai / depranker-git Star 0 Code Issues Pull requests DepRanker: A gene impact score calculator (prioritization method) for RNAi / CRISPR screen results python gene-prioritization pooled-screen Updated Dec 22, 2019 Python
taotliu / mMPA Star 0 Code Issues Pull requests R package for implementing marker-assisted mini-pooling with algorithm package r pooling pooled-screen Updated Oct 11, 2018 R