📖📚An introductory tutorial for BioJava
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Updated
Feb 23, 2024 - Python
📖📚An introductory tutorial for BioJava
Curated Labs, Tools for Protein Intrinsic Disorder (IDR) prediction.
Protein (language model) Benchmarking Collection - PBC
Network models of protein conformational entropy from dynamics
Parser for IUPRED2A (multi)result files
Bounded asymmetry diagnostics for DisProt proteins
A reproducible test of how well AlphaFold's pLDDT confidence score predicts real, curated intrinsic disorder — and where it breaks down.
Reproduce bioinformatics analysis for the paper Meyer, K. et al., Cell, 2018.
CAN (core and noncore) Disorder Protein retriever uses Homologene to find homologous proteins for human, fly, worm, yeast, and frog, and then queries those proteins in D2P2 database for disorder.
Parser that reassembles sequence from NetSurfp csv output file.
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