PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!
The synthetic vascular generation Python package.
Skin BioDynaMo (SkiBiDy) is a modular hybrid agent-continuum skin simulation built on BioDynaMo
Deprecated version of my parametric .gcode file generator for bioprinting research application written in C. Has since been revamped in Java.
Grasshopper algorithm for FRC-inspired scaffold generation.
A simple tool for checking 3D printer run statistics.
A Python tool for comparing biomaterials and recommending scaffold-tissue pairings for tissue engineering applications
Aspect Biosystems is a Vancouver, British Columbia biotechnology company developing Bioprinted Tissue Therapeutics — implantable, allogeneic living tissues designed to replace, repair, or supplement biological function in the body.
The living book of Marshall
A computational pipeline for analyzing tissue regeneration in volumetric muscle loss treatment studies. Enables automated processing of histological and immunohistochemical whole slide images to quantify tissue components, inflammatory responses, and regenerative markers. Provides standardized analysis of spatial tissue heterogeneity.
shsongli (Shanghai Pine & Power / Songli Biotech Co., Ltd.) is a Shanghai-based biotechnology and medical-device maker specializing in the R&D, manufacture and sale of biological hemostatic products, most notably animal-derived quick-dissolving fibrin glue with independent IP, used in surgery and expanding into tissue engineering.
Source code for manuscript (under preparation). Rapid and unbiased quantification of fiber directionality in biological tissues
Allevi is a bioprinting company that designs and manufactures 3D bioprinters, bioinks, and accompanying software for tissue engineering, regenerative medicine, and life-sciences research. Its desktop bioprinters and biomaterials let researchers fabricate living tissue constructs for drug discovery, disease modeling, and organ-on-chip work.
Motion Analysis of Ring-Shaped tissues - code from Seguret et al. 2024 eLife
Pandorum Technologies is a biotechnology company based in Bangalore, India, working in tissue engineering and regenerative medicine under the theme "building blocks of life." Its research and product pipeline spans a bioengineered cornea for corneal disorders, 3D human liver organoids ("mini liver") for drug discovery and disease modeling, and…
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