Miniprotein and antibody design pipeline for ESMFold2
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Jul 19, 2026 - Python
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vhh
Here are 7 public repositories matching this topic...
Code for NeurIPS 2023 paper "AVIDa-hIL6: A Large-Scale VHH Dataset Produced from an Immunized Alpaca for Predicting Antigen-Antibody Interactions"
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Nov 19, 2024 - Jupyter Notebook
Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"
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Oct 17, 2024 - Python
Small, fast, fully differentiable antibody Fv structure predictor in JAX. ~0.76M parameters, matches IgFold on CDR-H3, folds an Fv in ~0.8s on CPU.
protein-structure computational-biology flax antibody structure-prediction protein-folding jax nanobody vhh antibody-engineering
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Aug 21, 2026 - Python
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Jul 16, 2023 - Rich Text Format
For NBsTem Webserver
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Jun 7, 2026 - Python
Build a structural nanobody library from the PDB: mine RCSB for nanobody/VHH entries, split nanobody and antigen chains, renumber and superpose in headless PyMOL
pdb protein-structure computational-biology pymol protein-design rcsb nanobody vhh single-domain-antibody
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Aug 20, 2026 - Python
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